| Sega NAOMI GD-ROM |  Confidential Mission | 2000 | SEGA Enterprises, Ltd. Tokyo, Japan |
| Sega NAOMI GD-ROM | Shakatto Tambourine Model GDS-0002 | 2000 | SEGA Enterprises, Ltd. Tokyo, Japan |
| Sega NAOMI GD-ROM | Alienfront - Team Based Combat | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Capcom Vs. SNK - Millennium Fight 2000 Pro | 2001 | Capcom Co., Ltd. Japan |
| Sega NAOMI GD-ROM |  Capcom vs. SNK 2 - Mark of the Millennium 2001 | 2001 | Capcom Co., Ltd. Japan |
| Sega NAOMI GD-ROM | Capcom Vs. SNK 2 - Millionaire Fighting 2001 | 2001 | Capcom Co., Ltd. Japan |
| Sega NAOMI GD-ROM | Doki Doki Idol Star Seeker Model GDL 0005 | 2001 | G.Rev |
| Sega NAOMI GD-ROM | Dynamic Golf | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Get Bass 2 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Ikaruga Model GDL-0010 | 2001 | Treasure |
| Sega NAOMI GD-ROM | Kidou Senshi Gundam - Renpou vs. Zeon DX Model GDL-0006 | 2001 | Capcom Co., Ltd. Japan |
| Sega NAOMI GD-ROM | La Keyboard Model GDS-0017 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Lupin Sansei - The Shooting GDS-0018 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Monkey Ball | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Shakatto Tambourine 2001 Spring Model GDS-0013 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Shakatto Tambourine Chou Power Up Chu! Model GDS-0016 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Spikers Battle Model GDS-0005 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Sports Jam Model GDS-0003 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Street Fighter Zero 3 Upper Model GDL-0002 | 2001 | Capcom Co., Ltd. Japan |
| Sega NAOMI GD-ROM | Virtua Athlete | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Virtua Fighter 4 GDS-0012 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Virtua Tennis 2 - Sega Professional Tennis Model GDS-0015 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | World Series Baseball Model GDS-0010 | 2001 | SEGA Corp. |
| Sega NAOMI GD-ROM | Azumanga Daioh Puzzle Bobble Model GDL-0018 | 2002 | Taito Corp. Japan |
| Sega NAOMI GD-ROM | Cleopatra Fortune Plus Model GDL-0012 | 2002 | Taito Corp. Japan |
| Sega NAOMI GD-ROM | Guilty Gear XX Model GDL-0011 | 2002 | Sammy Corp. Japan |
| Sega NAOMI GD-ROM | Lupin - The Typing | 2002 | SEGA Corp. |
| Sega NAOMI GD-ROM | Moeru Casinyo Model GDL-0013 | 2002 | Altron Corp. |
| Sega NAOMI GD-ROM | Musapey's Choco Marker Model GDL-0014 | 2002 | Ecole Soft. |
| Sega NAOMI GD-ROM |  Pochi to Nyaa | 2002 | Compile |
| Sega NAOMI GD-ROM | Quiz Keitai Q mode Model GDL-0017 | 2002 | Amedio |
| Sega NAOMI GD-ROM | Sega Yonin Uchi Mahjong MJ | 2002 | SEGA Corp. |
| Sega NAOMI GD-ROM | Shootout Pool | 2002 | SEGA Corp. |
| Sega NAOMI GD-ROM | The Maze of the Kings | 2002 | SEGA Corp. |
| Sega NAOMI GD-ROM | Virtua Fighter 4 Evolution | 2002 | SEGA Corp. |
| Sega NAOMI GD-ROM | Border Down Model GDL-0023 | 2003 | G.Rev |
| Sega NAOMI GD-ROM | Guilty Gear XX #Reload Model GDL-0019 | 2003 | Sammy Corp. Japan |
| Sega NAOMI GD-ROM | Psyvariar 2 - The Will To Fabricate Model GDL-0024 | 2003 | Success Japan |
| Sega NAOMI GD-ROM | Shakatto Tambourine 4ever | 2003 | SEGA Corp. |
| Sega NAOMI GD-ROM | Shikigami no Shiro II Model GDL-0021 | 2003 | Alfa System |
